PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT31336.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family FAR1
Protein Properties Length: 431aa    MW: 50944.9 Da    PI: 8.9945
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT31336.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR121.48.3e-0757964989
        FAR1 49 ekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89
                ++++r+r e r+ C a++k k + ++ wev +++  H+H++
  PHT31336.1 57 KERKRQRLEYRCRCLARIKFKIS-NDMWEVCEFNDVHSHPM 96
                4688999**************99.9**************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 431 aa     Download sequence    
MENVNVEKGS SVQQGAHNVY TIDKKFVFEI GMKFDSKEKS YNAYNSYAVA KGFGVRKERK  60
RQRLEYRCRC LARIKFKISN DMWEVCEFND VHSHPMIVDN LRHFIQSGRK LTSSTKNILG  120
SMVEAGIRTK KMVRYLQKEA DGIENTGFIE QDAHNFIQAH KRNIISGGDA QTLINHFMHL  180
QSEDSNFFYS FQVDEDGRLC NFFWRDSFLE YTMSVLGIIS EENGRKNTYN NFIDQAPAIA  240
IAVREVFPEK CHRLCEWHID RNAQKNIPHL YWKQGFRNYF DTLLWRCKSE SEFEVRWQNM  300
ISDWDCANNT WLQKLWTKNA KHDSECEEYT KKKETMKSSM ASRLNGLMKE SFAVMTLVAN  360
DLDSEEIVRK YLYHAKIEII KHQSELYAEN HEKDKNKFNR TDSVTGCKDQ VLDPIKKKRQ  420
GKWIWKNEVK R
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.12e-27FAR1 family protein