PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT31486.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

DBB

Protein Properties

Length: 464aa MW: 50296.9 Da PI: 5.0384

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT31486.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	17.1	1.2e-05	4	47	5	42
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42 C+ +e e++ C ++ lC C ++ H H++vpl PHT31486.1 4 QCNACELAEAKVLCCADEAALCWYCDDKVHAAnklankHQRVPL 47 7****99*******************66889999999986 PP
2	zf-B_box	28.6	3e-09	53	94	2	37
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg......H 37 ++kC+ ++e +fC +++ llC++C ++H+ H PHT31486.1 53 PMPKCDICQETVGYFFCLEDRALLCRKCDISIHSVnayvsaH 94 689******9*******************435555555 PP

Sequence ? help Back to Top
Protein Sequence Length: 464 aa Download sequence
MKIQCNACEL AEAKVLCCAD EAALCWYCDD KVHAANKLAN KHQRVPLSAS SSPMPKCDIC 60 QETVGYFFCL EDRALLCRKC DISIHSVNAY VSAHQRFLLT GVKVGLEPIG PPGSASSGKS 120 PPIQKVVEQE SPPIPKSIAP VSSVAPSNGI LPVHTSETGD FAPSRLPSVG GSAAGIIPQW 180 QFDEFLGMGD FNQSYGYMDY GPSKADNGKL GESASSPILK DADAVVEGDD CFSTEVPDTC 240 WAVPQISSPP TASGLHWPTE TIQNPFDAAL LESDASYFPL QNIQDQQSNG SGFKRNDMIN 300 TEHVGFYLDA QWWFIDSLLP KKPVGFSGCQ QTGTRSSTSC SDLVNQVAQV EIGFGELVHG 360 THLSSSALGI FTVLDSEKRR LLNLNPAARN SLVVVDDTCD VLKIKRNKIF KNNLRFRLDN 420 VVSVHQCPDV KYGIRIHLLP IDDTIEGVTR NLVDAYLSVE ACAL

Sequence ? help Back to Top

Protein Sequence Length: 464 aa Download sequence

MKIQCNACEL AEAKVLCCAD EAALCWYCDD KVHAANKLAN KHQRVPLSAS SSPMPKCDIC  60
QETVGYFFCL EDRALLCRKC DISIHSVNAY VSAHQRFLLT GVKVGLEPIG PPGSASSGKS  120
PPIQKVVEQE SPPIPKSIAP VSSVAPSNGI LPVHTSETGD FAPSRLPSVG GSAAGIIPQW  180
QFDEFLGMGD FNQSYGYMDY GPSKADNGKL GESASSPILK DADAVVEGDD CFSTEVPDTC  240
WAVPQISSPP TASGLHWPTE TIQNPFDAAL LESDASYFPL QNIQDQQSNG SGFKRNDMIN  300
TEHVGFYLDA QWWFIDSLLP KKPVGFSGCQ QTGTRSSTSC SDLVNQVAQV EIGFGELVHG  360
THLSSSALGI FTVLDSEKRR LLNLNPAARN SLVVVDDTCD VLKIKRNKIF KNNLRFRLDN  420
VVSVHQCPDV KYGIRIHLLP IDDTIEGVTR NLVDAYLSVE ACAL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G78600.1	6e-86	DBB family protein