PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT31829.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 360aa    MW: 40786.2 Da    PI: 7.0279
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT31829.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.42.4e-20158207255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+GVr+++ +g+W+AeIrdp+    + +r++lg+f+tae Aa a+++a+++++g
  PHT31829.1 158 RYRGVRQRP-WGKWAAEIRDPY----KaTRVWLGTFDTAEAAASAYDEAALRFRG 207
                 7********.**********76....35************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 360 aa     Download sequence    
MCNIYHKVAN SRDFISSSSS SRTVFETMFW GNINREEEMS VMVSALTHVV VGQDHRVVNP  60
LQEQTEKIGA ADHNDNLFSW GVGEKRRREE EQMQQFLHGN HSSHDMRSSG DESTSIRTIT  120
SSTPTTEATF IYTTSTHHDN QNSSSDQSNN NNNQPRRRYR GVRQRPWGKW AAEIRDPYKA  180
TRVWLGTFDT AEAAASAYDE AALRFRGSKA KLNFPENVRL LPSSIQQPPN NTLYSVSSSP  240
EPIVHTSSQH RSNFTGHPSR DEDPIVHTSM YRSNFTGYSS RDEEPIGHIS SPYHSNFIHH  300
TSRDEPIIHT TYDHRVQQGA YFPFVHFQAG NTSQSTSGSD FHQAATFNRS NYDHPSSSSG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64750.17e-22ERF family protein