PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT31913.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family WRKY
Protein Properties Length: 145aa    MW: 16600.4 Da    PI: 8.8418
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT31913.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY65.77.2e-21107145139
                 ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEE CS
        WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkve 39 
                 ldDgy+WrKYG+K+vk+s++pr+YY+C+  gC+vkk+ve
  PHT31913.1 107 LDDGYKWRKYGKKMVKNSPNPRNYYKCSNGGCNVKKRVE 145
                 59************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 145 aa     Download sequence    
MENFSYNYSN PNPNNGDIYS SNFIDTPENF ELSGCYLFPE DGSSDEFLSQ NEFVQSASDS  60
RGSYSNIKPA PTTTHHNMQV KCTKGVMKKV DAKSRVAFRF RSELEVLDDG YKWRKYGKKM  120
VKNSPNPRNY YKCSNGGCNV KKRVE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G26170.13e-27WRKY family protein