PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT31937.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family GATA
Protein Properties Length: 331aa    MW: 34716.3 Da    PI: 6.5846
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT31937.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA48.71.1e-15242277134
        GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkg 34 
                 C++Cg ++  Tp++Rrgp g+++LCnaCGl+++ kg
  PHT31937.1 242 CRHCGISSksTPMMRRGPAGPRSLCNACGLKWANKG 277
                 *****99999**********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 331 aa     Download sequence    
MYGRETMNAA SLHHQQTQID EEDDDGAVDA GAVVGAGGSG GGGGGIESMD NPTSHIRYEQ  60
HHHSHSHAPL HNGGGGAMEA AGMNGVEGVS HNALYGPPSE IVPAAGSGAS DQLTLSFQGE  120
VYVFDSVSPE KVQAVLLLLG GYEVPAGIPT VNVAPQSQRA SGDFPGRLNQ PQRAASLNRF  180
REKRKERCFD KKIRYTVRKE VAMRMQRKKG QFTSAKSISD EAGSSSADWN EGSGQEEQET  240
SCRHCGISSK STPMMRRGPA GPRSLCNACG LKWANKGILR DLSKVPAPGA QDQAAKSGEQ  300
SNGEPSGSDA MATAAAMITP SGESTLVTAE R
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21175.22e-86GATA family protein