PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT32015.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

NF-YB

Protein Properties

Length: 162aa MW: 17446.4 Da PI: 5.3129

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT32015.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	171.6	8.6e-54	26	118	2	94
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrele 94 reqdr+lPian++rimkk+lPan+ki+kd+k+tvqecvsefisf+tseasdkcq+ekrktingddll alatlGfedy+eplkvyl++yre + PHT32015.1 26 REQDRYLPIANIGRIMKKALPANGKIAKDSKDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLSALATLGFEDYIEPLKVYLTRYREGD 118 89****************************************************************************************965 PP

Sequence ? help Back to Top
Protein Sequence Length: 162 aa Download sequence
MAEPASSGGG GSHESGGDPS PQSNLREQDR YLPIANIGRI MKKALPANGK IAKDSKDTVQ 60 ECVSEFISFI TSEASDKCQK EKRKTINGDD LLSALATLGF EDYIEPLKVY LTRYREGDAK 120 GSARVGDASV RKDIVGSQLG SNTQFMYEGS FAQGLNYGNS QI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G53340.1	1e-69	NF-YB family protein