PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT32058.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

ERF

Protein Properties

Length: 622aa MW: 70860.6 Da PI: 9.4388

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT32058.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	60.1	5.4e-19	398	447	2	55
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+W+AeIrdp+ + +r++lg+f+tae Aa +++a+++++g PHT32058.1 398 HYRGVRQRP-WGKWAAEIRDPK----KaARVWLGTFDTAEAAALVYDEAALRFKG 447 7******.******94....45**********************988 PP

Sequence ? help Back to Top
Protein Sequence Length: 622 aa Download sequence
MRHNIPQNLF QYKSSTSIAR PIVSTSVAPP STKVSTLAFD PAIVPPQSAS KSMFNTLDDH 60 YYTPEPTSML VGPPKFLTKK SNMTEEQEKM ARKIKSTEKA TKNSQEIMNY EDVAYKDGDM 120 YSSDNLSPSL EISKFEKHNR YEDSVKYLGQ YFHQLRGTKG KKNENVLSLQ GQSKAQEVQP 180 SNIISVNPEL AHQIHMLTCN KLYAHPFSYP QWHAPITQHH PGPPHIYQRI SKSKFHPRPK 240 FAMRRKEKDN FTPIGESYTS LFQTLRQWGM ITPIPGYIPD PHSKYFDPNS TGSSKIITKV 300 ATVDRRHGKR PFSSNESEEK EDIDESIFPI YSERSQHDMS AMVSVLSQVI GNTNNNNATT 360 NISSLSSVHG INPLTLPQSA VATTNQIQEQ GNQLRKRHYR GVRQRPWGKW AAEIRDPKKA 420 ARVWLGTFDT AEAAALVYDE AALRFKGNKA KLNFPERVQS GNTQYLATTH HHQQQLFDHH 480 HQHYSSINNN NNNNNNNNNN NNNNNNNIFN LIPHMVTQPN LYQQHFPNVH HYTELLPGGS 540 NNNIDHMMNF GVSESSFYHQ QSSSGGNFAS PNTSLELQQQ QQSSYYYNQE EDFLRFPMNF 600 GNSSTSTGPP SESNWDDFGP RK

Sequence ? help Back to Top

Protein Sequence Length: 622 aa Download sequence

MRHNIPQNLF QYKSSTSIAR PIVSTSVAPP STKVSTLAFD PAIVPPQSAS KSMFNTLDDH  60
YYTPEPTSML VGPPKFLTKK SNMTEEQEKM ARKIKSTEKA TKNSQEIMNY EDVAYKDGDM  120
YSSDNLSPSL EISKFEKHNR YEDSVKYLGQ YFHQLRGTKG KKNENVLSLQ GQSKAQEVQP  180
SNIISVNPEL AHQIHMLTCN KLYAHPFSYP QWHAPITQHH PGPPHIYQRI SKSKFHPRPK  240
FAMRRKEKDN FTPIGESYTS LFQTLRQWGM ITPIPGYIPD PHSKYFDPNS TGSSKIITKV  300
ATVDRRHGKR PFSSNESEEK EDIDESIFPI YSERSQHDMS AMVSVLSQVI GNTNNNNATT  360
NISSLSSVHG INPLTLPQSA VATTNQIQEQ GNQLRKRHYR GVRQRPWGKW AAEIRDPKKA  420
ARVWLGTFDT AEAAALVYDE AALRFKGNKA KLNFPERVQS GNTQYLATTH HHQQQLFDHH  480
HQHYSSINNN NNNNNNNNNN NNNNNNNIFN LIPHMVTQPN LYQQHFPNVH HYTELLPGGS  540
NNNIDHMMNF GVSESSFYHQ QSSSGGNFAS PNTSLELQQQ QQSSYYYNQE EDFLRFPMNF  600
GNSSTSTGPP SESNWDDFGP RK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G61890.1	5e-41	ERF family protein