PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT32263.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family GRAS
Protein Properties Length: 131aa    MW: 14138.3 Da    PI: 8.8909
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT32263.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS102.65.5e-321312390199
        GRAS  90 ilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrl 186
                 + kf++l +N a+++a+++++ +HiiD+ i qG Q ++L++aLa+Rp+ +p++RiTg +++ s   +   ++ +g+rL+++ +++++pfef++ va ++
  PHT32263.1  13 CAKFGYLSTNGAVVDAMKNDNSIHIIDLHIAQGSQLITLIHALAARPGRSPRIRITGTDNSISAyaRGGGIKIVGRRLSSVIASCNIPFEFHL-VAASC 110
                 679*********************************************************877788999***********************9.799** PP

        GRAS 187 edleleeLrvkpg 199
                 +d+e+e+L+v+pg
  PHT32263.1 111 SDVEIEHLNVRPG 123
                 **********997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 131 aa     Download sequence    
MPRGDLKEVL IVCAKFGYLS TNGAVVDAMK NDNSIHIIDL HIAQGSQLIT LIHALAARPG  60
RSPRIRITGT DNSISAYARG GGIKIVGRRL SSVIASCNIP FEFHLVAASC SDVEIEHLNV  120
RPGSRFEPYA Q
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48150.15e-39GRAS family protein