PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT32321.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 389aa    MW: 43061.6 Da    PI: 4.5976
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT32321.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.61.5e-18121170255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+G+r+++ +g+W+AeIrdp     +  r++lg+f taeeAa+a++  +++++g
  PHT32321.1 121 QYRGIRQRP-WGKWAAEIRDPQ----KgVRVWLGTFSTAEEAARAYDVEARRIRG 170
                 69*******.**********94....35************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 389 aa     Download sequence    
MCGGAIISDW IPPPRSSRRL TSDLLWDFSD LNNNNNNEEK KKKKKNSSCK TLRSEVVDFA  60
ADFQDFNDCF DEDFKDYAFD VKPLAFHASQ LSQPAPGSKS LNSVDSNKEI EKSSKRKRKN  120
QYRGIRQRPW GKWAAEIRDP QKGVRVWLGT FSTAEEAARA YDVEARRIRG NKAKVNFPDE  180
APVPAPRQAA KVNPEKVLSD ESSNPVLSDT ALMNLTDGCC NNLGFFEEKT KKLYGYEALR  240
TTTVNMGPNS YIPPPAAGVY FNSDQGSNSF DPSDFGWGET CSGTPEISSV LSAAIECDET  300
QFVEGADVEV KLKSCSNNLV PDDGNTANKP PEEFPAFESQ MKFFHTPYPE ANWDGSVDAF  360
LNADASQGGE NAVDLWSIDE LSSLMGGVY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G53910.18e-59ERF family protein