PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT32393.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

FAR1

Protein Properties

Length: 113aa MW: 12909 Da PI: 9.1169

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT32393.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	21.6	7.1e-07	2	31	61	90
FAR1 61 gCkaklkvkkekdgkwevtkleleHnHela 90 +Cka+++ ++++dg vt++ leHnHel PHT32393.1 2 DCKARVNCHLMTDGSCAVTTVILEHNHELD 31 8***************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 113 aa Download sequence
MDCKARVNCH LMTDGSCAVT TVILEHNHEL DPTLSRFLHR KLSRTLKRSL VAHDIACLRP 60 SKSIRFLEVE VGGPERMRST SKDCRNYILQ QQRLQTLSSD AAALHKFFLE MQG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-07	FAR1 family protein