PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT32758.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family WRKY
Protein Properties Length: 303aa    MW: 33535.5 Da    PI: 9.2176
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT32758.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY83.32.4e-26223281259
                 --SS-EEEEEEE--TT-SS-EEEEEE.-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrC.tsagCpvkkkversaedpkvveitYegeHnhe 59 
                 +D+++WrKYGqK +kgs++p +YY+C +++gC +kk+ver+ +dp ++++tYe+eH h+
  PHT32758.1 223 RDECSWRKYGQKLIKGSPYPWAYYKCiSFPGCLAKKHVERAMDDPMMLIVTYEEEHCHT 281
                 699***********************5556***************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    
MVLFSKMNKE LALQEAASTG LKTMEHLIKL EANEPVVQVD CREITDFAIA NLKKANSMVG  60
RTGHARFRRG PVQVQAQNET ESQAQVYDSL TLLSLSPYSY MEKERVLAPV PLSVVALPVQ  120
IELTFGFRKP SVNVIAAGVG GDGGGAGVMK YKYTFDKLNK VISSSSFHSS NKGEGSGSTS  180
NFAPPSSVSL LSMAQVVFAR KQSSTTGKRY RVQEQSGMVL AKRDECSWRK YGQKLIKGSP  240
YPWAYYKCIS FPGCLAKKHV ERAMDDPMML IVTYEEEHCH TQVAIQEYNS LMMTFGSAEE  300
KKE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31550.21e-35WRKY family protein