PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT32955.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

bHLH

Protein Properties

Length: 446aa MW: 48939.7 Da PI: 5.0562

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT32955.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	33.5	7.6e-11	383	428	6	55
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +++Er RR ri +++ +L+el+P+ +k + a++L A +YIk+L+ PHT32955.1 383 SIAERVRRTRISERMRKLQELVPNM----DKQTNTADMLDFAADYIKELE 428 689*******************7....688*************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 446 aa Download sequence
MDHRGHQKQQ MTSGLTRYRS APSSCFTSLL SSNNPAGGGG NCGYARDDFD QFLNPRSSNN 60 GIKQVFDRFV ANIGPQDSNP DGLMSDSQQI NQNPMSNMNV RSDVVAPMKQ EHDAQHQQPI 120 NSQFIAPVKQ EITQQSSDYS LASQMNYQTQ AQQNQNATDF SLAMDSFCRY LDSVDTNRLN 180 QMEMDGGFGV GTSNSNLTRY NSSPAGFFAQ VNIENEYGAL RGIGSYGTGS GSNAAAEQAS 240 FSNPSRFSSQ KSGQPNSSGL LAPISELGAK SIEESRQSDE GFGKGHKNDE SYMTGFPMPS 300 WDDSQILTDD YLQVPEDDEA GPFTNVNASD NQSSEGRACP PTLLSHLSLP QTSAELSAME 360 KLLEDSVPCK VRAKRGCATH PRSIAERVRR TRISERMRKL QELVPNMDKQ TNTADMLDFA 420 ADYIKELETQ VKALSETRSK CTCSHK

Sequence ? help Back to Top

Protein Sequence Length: 446 aa Download sequence

MDHRGHQKQQ MTSGLTRYRS APSSCFTSLL SSNNPAGGGG NCGYARDDFD QFLNPRSSNN  60
GIKQVFDRFV ANIGPQDSNP DGLMSDSQQI NQNPMSNMNV RSDVVAPMKQ EHDAQHQQPI  120
NSQFIAPVKQ EITQQSSDYS LASQMNYQTQ AQQNQNATDF SLAMDSFCRY LDSVDTNRLN  180
QMEMDGGFGV GTSNSNLTRY NSSPAGFFAQ VNIENEYGAL RGIGSYGTGS GSNAAAEQAS  240
FSNPSRFSSQ KSGQPNSSGL LAPISELGAK SIEESRQSDE GFGKGHKNDE SYMTGFPMPS  300
WDDSQILTDD YLQVPEDDEA GPFTNVNASD NQSSEGRACP PTLLSHLSLP QTSAELSAME  360
KLLEDSVPCK VRAKRGCATH PRSIAERVRR TRISERMRKL QELVPNMDKQ TNTADMLDFA  420
ADYIKELETQ VKALSETRSK CTCSHK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G51140.1	1e-57	bHLH family protein