PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT33046.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family WRKY
Protein Properties Length: 270aa    MW: 29747.1 Da    PI: 8.88
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT33046.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY92.72.8e-29190248259
                 --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                  D+++WrKYGqK +kgs++pr+YY+Cts  gCp+kk+ve++ +dp ++++tYe+eH+h+
  PHT33046.1 190 ADECSWRKYGQKLIKGSPYPRAYYKCTSFlGCPAKKHVEKAMDDPMMLVVTYEEEHHHK 248
                 699************************999****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    
MVGRTDHARF RCGPVQVQAK NKAESRAQVH DSLTSLSLSP YVYMDKERVL ASMTLYVVAS  60
VAAPVQTELT LGFKMPSVND VGGGAGVGDM KWKDDFGSMK NGINSSSFLS VITGEGSECI  120
VNVVPFFSSS SMLLLPMAQV VSTEKHSSAT GKRYREQEQS GDGSGKKMKF LPRKVIRTPV  180
ISSEITDIPA DECSWRKYGQ KLIKGSPYPR AYYKCTSFLG CPAKKHVEKA MDDPMMLVVT  240
YEEEHHHKQV TVQEYNSQIM VLGSAEGKKE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31550.27e-44WRKY family protein