PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT33157.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

MYB

Protein Properties

Length: 269aa MW: 31438.9 Da PI: 6.9085

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT33157.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	59.5	7.5e-19	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT eEd +lv++++ +G g+W+t a++ g++Rt+k+c++rw++yl PHT33157.1 14 RGPWTVEEDFILVNYIAHHGEGRWNTLAHCAGLKRTGKSCRLRWLNYL 61 89********************************************97 PP
2	Myb_DNA-binding	50.1	6.2e-16	68	110	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g+ T eE++l+++++ ++G++ W++Ia++++ gRt++++k++w++ PHT33157.1 68 GNITLEEQLLILQLHSRWGNR-WSKIAQHLP-GRTDNEIKNYWRT 110 6779***************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 269 aa Download sequence
MDKIRENNIV ELKRGPWTVE EDFILVNYIA HHGEGRWNTL AHCAGLKRTG KSCRLRWLNY 60 LRPDVRHGNI TLEEQLLILQ LHSRWGNRWS KIAQHLPGRT DNEIKNYWRT RVQKHAKTLK 120 CDVNSKQFQD TLHYVWIPRL VERIQASKVQ NNNSISVAQQ PVLRTGITEL VPIQLANNSN 180 NNNDNNNSNY LSASVTPENS SVATSSENSI GTTQVSHNQD YYQVNQSDYH HQLWFEDNYQ 240 AMDQQNSIQL WMDNEDVFDN LCNIEDIWS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G49620.1	2e-80	MYB family protein