PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT33167.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family GRAS
Protein Properties Length: 517aa    MW: 59165.4 Da    PI: 5.4358
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT33167.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS285.41.6e-871275031374
        GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlar.svselykalppsetse.knsseelaalklfsevsPilkfshlt 97 
                 lve Ll+ Ae v+++++ +a +lL++ ++l+s++g+p++Rl+ yf  AL++r+ r +++e  k++   e ++ +n+ + ++a ++ ++  Pi ++  ++
  PHT33167.1 127 LVERLLASAEKVEEKKFDRAINLLNECEKLSSKSGNPVERLVYYFSGALRERVDReTGKESTKSVGLHEMQDlQNTLRGINACTIAVQDMPICQVVKFA 225
                 5789***************************************************778888888855555441568999999999************** PP

        GRAS  98 aNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRp....egppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledlele 192
                   qaI+e + ++++vHiiD++i++G+QW  L+qaL++      +    l+i ++ s   +s++++eetg+rL +fAe++++ + f+++ +++++dl+ e
  PHT33167.1 226 GIQAIVENIGNAKKVHIIDLEIKMGVQWTILMQALTTHHknsqNHVEYLKISALLSGVDQSRTNVEETGKRLMSFAESFHMALCFKIVEVEDVADLKRE 324
                 ************************************8774443345589*******9999*************************************** PP

        GRAS 193 eLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellg 291
                 +L+++p+E++aV +++ + +ll ++ +l+s    ++ ++++l+P++++v+e ea++ns+ F++rf+eal y+ a+fd ++  + +++++r+ +E e++ 
  PHT33167.1 325 DLDIDPDEVIAVYSQYFMSNLLTQQEKLDS----LIGFIRGLNPRIMIVAEVEANLNSPVFANRFIEALFYHGAFFDLFQDCMKNDESTRMAMESEVMW 419
                 **********************66666666....***************************************************************** PP

        GRAS 292 reivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
                   i+n++a eg+err rh + + Wre ++++G+ ++++s++   qak +++k++ ++ +++e +++ l +gWk+ pL s+SaW+
  PHT33167.1 420 HGIRNIIAVEGEERRIRHVSIQLWREYFKRFGMLEIRMSNSSLYQAKVVVEKFSgGNSFTLEMNENYLAIGWKGIPLNSLSAWK 503
                 ******************************************************9999*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 517 aa     Download sequence    
MQEQNEQDFV TFDDWDFDVE EETTNVVYVK ETIDDNKKAR SSSIPSLNIL KDFGNGFRKL  60
KGQKINVQTS ESAYTPRVCK LSTDEILRLG GQKFIQSTES SVSGLDHPFG VALFSLRDED  120
YSRSVELVER LLASAEKVEE KKFDRAINLL NECEKLSSKS GNPVERLVYY FSGALRERVD  180
RETGKESTKS VGLHEMQDLQ NTLRGINACT IAVQDMPICQ VVKFAGIQAI VENIGNAKKV  240
HIIDLEIKMG VQWTILMQAL TTHHKNSQNH VEYLKISALL SGVDQSRTNV EETGKRLMSF  300
AESFHMALCF KIVEVEDVAD LKREDLDIDP DEVIAVYSQY FMSNLLTQQE KLDSLIGFIR  360
GLNPRIMIVA EVEANLNSPV FANRFIEALF YHGAFFDLFQ DCMKNDESTR MAMESEVMWH  420
GIRNIIAVEG EERRIRHVSI QLWREYFKRF GMLEIRMSNS SLYQAKVVVE KFSGGNSFTL  480
EMNENYLAIG WKGIPLNSLS AWKFRKRNPF HGVYLTL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66350.17e-52GRAS family protein