PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT33177.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

CAMTA

Protein Properties

Length: 729aa MW: 83048.6 Da PI: 7.9144

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT33177.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	123.5	9.6e-39	1	81	37	117
CG-1 37 gsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcywlLeeelekivlvhylev 117 g+++L++ k++r+fr+DG++wkkkkdgktv+E+he+LKvg+ e +++yYah+e+ +tf rrcywlL+++le++vlvhy+e+ PHT33177.1 1 GTIVLFDSKMLRNFRRDGHNWKKKKDGKTVKEAHEHLKVGNEERIHVYYAHGEDSSTFVRRCYWLLDKTLENVVLVHYRET 81 789***************************************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 729 aa Download sequence
GTIVLFDSKM LRNFRRDGHN WKKKKDGKTV KEAHEHLKVG NEERIHVYYA HGEDSSTFVR 60 RCYWLLDKTL ENVVLVHYRE TIEGFSNNKA APVSSGSALS GPADMSASWD LSGQPDSAVD 120 RQYSVSQHAH LEPNSDMTVQ NHEQRLLEIN TLEWDDLLAP GDSNKIISTQ QAGGRTVSVQ 180 HTSYEQHNLC ELNGYSLHLD TNEITFQTAD GQMTSSFQEN ESGVMTVSTG DSSDSQNKDT 240 LQTQDSFGRW MSYLITDPPD PQMIQLSNLL HQQIFVIGHF HGGQSHLDSS SLCCVCGDAC 300 FPAEILQHVV YRCVVSPQTP GLSLNILSSK IHQELLKDAK TFAGKCSHII DNWACLIKSI 360 EDKKLSVACA KDRLFELSLR TRLQEWLMER IVEGCKISEH DERDYRDKYG WTALHWAAYY 420 GREKMVATLL SAGAKPNLVT DPTSENLGGC TASDVASKNG HEGLGAYLAE KAIVAQFKDM 480 ALAGNISGSL QTTTESTNPG NFTEEELNLK DSLAAYCTAA DADARSQAAF RERSLKARTK 540 AVESSNQEME ARNIIAAMKI QHAFRNYEMQ KQLAAAARIQ YRFRTWKMRK EFLHIRRQAI 600 KIQAVFRGFQ VRRHYWEIIW SVGVLEKALF RWRLKKKGFR GLQLPSSQVV NHKPDDMEED 660 FFQASRKQAE ERIERSVVRV QAMFRSKQTQ EQYWRMKLEH NKATMDPKFL RNQRYARKHN 720 KKTVEYAEE

Sequence ? help Back to Top

Protein Sequence Length: 729 aa Download sequence

GTIVLFDSKM LRNFRRDGHN WKKKKDGKTV KEAHEHLKVG NEERIHVYYA HGEDSSTFVR  60
RCYWLLDKTL ENVVLVHYRE TIEGFSNNKA APVSSGSALS GPADMSASWD LSGQPDSAVD  120
RQYSVSQHAH LEPNSDMTVQ NHEQRLLEIN TLEWDDLLAP GDSNKIISTQ QAGGRTVSVQ  180
HTSYEQHNLC ELNGYSLHLD TNEITFQTAD GQMTSSFQEN ESGVMTVSTG DSSDSQNKDT  240
LQTQDSFGRW MSYLITDPPD PQMIQLSNLL HQQIFVIGHF HGGQSHLDSS SLCCVCGDAC  300
FPAEILQHVV YRCVVSPQTP GLSLNILSSK IHQELLKDAK TFAGKCSHII DNWACLIKSI  360
EDKKLSVACA KDRLFELSLR TRLQEWLMER IVEGCKISEH DERDYRDKYG WTALHWAAYY  420
GREKMVATLL SAGAKPNLVT DPTSENLGGC TASDVASKNG HEGLGAYLAE KAIVAQFKDM  480
ALAGNISGSL QTTTESTNPG NFTEEELNLK DSLAAYCTAA DADARSQAAF RERSLKARTK  540
AVESSNQEME ARNIIAAMKI QHAFRNYEMQ KQLAAAARIQ YRFRTWKMRK EFLHIRRQAI  600
KIQAVFRGFQ VRRHYWEIIW SVGVLEKALF RWRLKKKGFR GLQLPSSQVV NHKPDDMEED  660
FFQASRKQAE ERIERSVVRV QAMFRSKQTQ EQYWRMKLEH NKATMDPKFL RNQRYARKHN  720
KKTVEYAEE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G16940.1	0.0	CAMTA family protein