PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT33179.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family GATA
Protein Properties Length: 170aa    MW: 18634 Da    PI: 10.2599
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT33179.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA59.93.2e-193872135
        GATA  1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
                C+ CgttkTplWR gp g+k+LCnaCG++ rkk++
  PHT33179.1 38 CADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRR 72
                ********************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 170 aa     Download sequence    
MVDISDKVSD HKVQETEEMS GQSKTPERVS LETSQKTCAD CGTTKTPLWR GGPAGPKSLC  60
NACGIRSRKK RRALLGLNKE DKKLKKSSNK SIDNHPRHHQ NQSSNSSSTS SSGESTTSKA  120
VVEKNECIPF KKRALHFGRP KSNSTHTRKL SEEEQAAFLL MALSCGSVYA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16990KKRRALLGLNKEDKKLKKSSNK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G49300.12e-28GATA family protein