PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT33180.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

ARR-B

Protein Properties

Length: 567aa MW: 63659 Da PI: 5.7136

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT33180.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	85	7.4e-27	193	246	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r+ W+peLH++F++a++qLGG +kA+P++il+lm+v+gL +ehv+SHLQkYRl PHT33180.1 193 KARVLWSPELHDKFIQAINQLGG-DKAVPQKILKLMNVPGLEREHVASHLQKYRL 246 689****************66.78**************************8 PP
2	Myb_DNA-binding	42.2	1.9e-13	197	245	3	48
SS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 W++e+++++++a++qlGg+ + +I + m+ g+ ++++ s++qky+ PHT33180.1 197 LWSPELHDKFIQAINQLGGDkaVPQKILKLMNvPGLEREHVASHLQKYR 245 6***********************************************7 PP
3	Response_reg	80.2	6.7e-27	22	130	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGak 95 +l+vdD+p+ +++l+ +l+k +y ev++++++e al ll+e++ ++l++ D+ mp+mdG++ll+ i e +lp+i+++ ++ + + +a+ Ga+ PHT33180.1 22 LLVVDDDPTCLRVLECMLKKCHY-EVTTCKHAEVALSLLRENRnnFHLVISDVHMPDMDGFKLLELIVLEM-NLPVIMMSVDDSTSVIMKAVIHGAH 116 599******************.***********999889******************8865.9******************** PP EEEESS--HHHHHH CS Response_reg 96 dflsKpfdpeelvk 109 d+l+Kp+++e+l + PHT33180.1 117 DYLVKPVSIEALKN 130 ********9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 567 aa Download sequence
MATSGECLNS GGVSGEFPTF RLLVVDDDPT CLRVLECMLK KCHYEVTTCK HAEVALSLLR 60 ENRNNFHLVI SDVHMPDMDG FKLLELIVLE MNLPVIMMSV DDSTSVIMKA VIHGAHDYLV 120 KPVSIEALKN IWQHVVRQNK DEWKGKILDR LGNVEGAEYS DAAKEGRLKS SKKRKGEEEN 180 EIGERNDTTT VKKARVLWSP ELHDKFIQAI NQLGGDKAVP QKILKLMNVP GLEREHVASH 240 LQKYRLQLQK NRSGLESGFM GHSEVTIGTL LNNLDVQTLA PMDQHPVQNL TTHQGRMWVR 300 PKSPIFIKEP WGSPTTKSPI FMQRNHLSFQ NPVLRYQGRQ QMNNSNKQVN LPCGIPTTEQ 360 FLRMNIPVAR ISQPQIRVQN MLSESNKILS QNGIVDDTRD SMYNQVPQTA VDFSLNQNIP 420 LAGTNFLLSA NSTVSATTEQ VNVGYDNFSE LCQQKAQDWG LQNVVGSTFD ASMEQSEQNV 480 NAPIAEAVFS SRQEIGHVNP IDGPQVNSVR AAERYTDSSY QSTIFLEPFE QDNDLMSALL 540 EQQHESTVGQ VDSVFGHDED AFENLPV

Sequence ? help Back to Top

Protein Sequence Length: 567 aa Download sequence

MATSGECLNS GGVSGEFPTF RLLVVDDDPT CLRVLECMLK KCHYEVTTCK HAEVALSLLR  60
ENRNNFHLVI SDVHMPDMDG FKLLELIVLE MNLPVIMMSV DDSTSVIMKA VIHGAHDYLV  120
KPVSIEALKN IWQHVVRQNK DEWKGKILDR LGNVEGAEYS DAAKEGRLKS SKKRKGEEEN  180
EIGERNDTTT VKKARVLWSP ELHDKFIQAI NQLGGDKAVP QKILKLMNVP GLEREHVASH  240
LQKYRLQLQK NRSGLESGFM GHSEVTIGTL LNNLDVQTLA PMDQHPVQNL TTHQGRMWVR  300
PKSPIFIKEP WGSPTTKSPI FMQRNHLSFQ NPVLRYQGRQ QMNNSNKQVN LPCGIPTTEQ  360
FLRMNIPVAR ISQPQIRVQN MLSESNKILS QNGIVDDTRD SMYNQVPQTA VDFSLNQNIP  420
LAGTNFLLSA NSTVSATTEQ VNVGYDNFSE LCQQKAQDWG LQNVVGSTFD ASMEQSEQNV  480
NAPIAEAVFS SRQEIGHVNP IDGPQVNSVR AAERYTDSSY QSTIFLEPFE QDNDLMSALL  540
EQQHESTVGQ VDSVFGHDED AFENLPV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16110.1	1e-107	ARR-B family protein