PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT33314.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

HD-ZIP

Protein Properties

Length: 210aa MW: 24112.9 Da PI: 5.4703

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT33314.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	59.5	5.2e-19	87	141	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ ++tk+q Lee F++n++++ +e+e LA++l+L +rqV vWFqNrRa+ k PHT33314.1 87 RKKLRLTKQQSFLLEESFRQNHTLNPKEKEALAMQLKLRTRQVEVWFQNRRARSK 141 78889************************************************98 PP
2	HD-ZIP_I/II	110.7	9.7e-36	87	175	1	89
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLre 89 +kk+rl+k+q+ lLEesF+++++L+p++K++la +L+l++rqv+vWFqnrRAR k+kq+E+++e+Lkr++ +l+e+n+rL+keveeLr+ PHT33314.1 87 RKKLRLTKQQSFLLEESFRQNHTLNPKEKEALAMQLKLRTRQVEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLKKEVEELRA 175 69*************************************************************************************94 PP

Sequence ? help Back to Top
Protein Sequence Length: 210 aa Download sequence
MEIMPENSTC LELTISIPGS SSNSSSFPSP GGGGCGYNTM RELDINQVPS SGNINEEESM 60 EEDQDQEEEE ESSNNNNNNN NNGVPPRKKL RLTKQQSFLL EESFRQNHTL NPKEKEALAM 120 QLKLRTRQVE VWFQNRRARS KLKQTEMECE YLKRWFGSLT EQNRRLKKEV EELRAMKVGV 180 LSPHTCPSTL TMCPHCERVT TTTIRDESRI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	136	144	RRARSKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01430.1	3e-61	HD-ZIP family protein