PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT33531.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family TCP
Protein Properties Length: 330aa    MW: 37412.7 Da    PI: 8.2166
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT33531.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP127.41.4e-39141249288
         TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt......................ssssaseceaess 78 
                 +gkkdrhski+T++g RdRR+Rls+++a++fFdLqd+LGfdk+sktieWL+ ++k aikelt++                      s +++++c+++++
  PHT33531.1 141 TGKKDRHSKICTAQGVRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLFSKSKNAIKELTRSiplennedhrkmrkiesrdrprSEKPNRKCNQDQE 239
                 79**************************************************************88876666666666665555555555555544444 PP

         TCP  79 sssasnsssg 88 
                   +++ +s++
  PHT33531.1 240 LDETNPKSID 249
                 4444433333 PP
Sequence ? help Back to Top
Protein Sequence    Length: 330 aa     Download sequence    
MFPTSNIIHD PFSYTSQELL KQSYNTHDHQ NPNSTSKLVV EEEDPFFLNF PSPFDFDDHE  60
LPLNQIFSQT SDNNHGTNQA GPDSAIKDNH SVDISRSTLL SAKIMGDQSS NPDISRKNPT  120
EPAMATSSKK RKLSAKPRRR TGKKDRHSKI CTAQGVRDRR MRLSLQIARK FFDLQDMLGF  180
DKASKTIEWL FSKSKNAIKE LTRSIPLENN EDHRKMRKIE SRDRPRSEKP NRKCNQDQEL  240
DETNPKSIDK LGSNSSKSYL ENQFANVGIM EKYLGGASCS SITSIFEYDN NGVIKGGIDN  300
ISDNYCFNNM GFLENCTITN EVQIPFAAGN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1129140KKRKLSAKPRRR
2130141KKRKLSAKPRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68800.11e-32TCP family protein