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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| TF ID | PHT33605.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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| Family | NF-YA | ||||||||
| Protein Properties | Length: 324aa MW: 36562.7 Da PI: 10.6481 | ||||||||
| Description | NF-YA family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | CBFB_NFYA | 63.3 | 7e-20 | 124 | 170 | 3 | 50 |
CBFB_NFYA 3 plYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrR 50
p+YVNaKQy++IlkRRq ak ++++kl k++kpyl+eS h+hA++
PHT33605.1 124 PIYVNAKQYSAILKRRQVHAKRQAQNKL-VKNKKPYLYESQHHHAMNX 170
9***************************.*****************85 PP
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| 2 | CBFB_NFYA | 96.3 | 3.4e-30 | 229 | 283 | 3 | 58 |
CBFB_NFYA 3 plYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58
p+YVNaKQy++IlkRRq Rak ++++kl k+rkpylheSRh+hA++R+RgsgGrF
PHT33605.1 229 PIYVNAKQYSAILKRRQVRAKRQAQNKL-VKNRKPYLHESRHRHAMKRARGSGGRF 283
9***************************.**************************9 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 324 aa Download sequence |
MFRIKALSHG AFVRSSPSPV YFTLATLMEK IVSPLSAGSL KLASTDVKVN PIVRFHYFRN 60 PGDGCGEPQV HHDRPTACLS YPWADTYFGR LVATYGSNAI IYPQMVGVTS TRVALPLECA 120 ESLPIYVNAK QYSAILKRRQ VHAKRQAQNK LVKNKKPYLY ESQHHHAMNX PQPQVHHDHP 180 TACLSYPWAD TYFGRLVATY GSNAIIYPQM VGVTSTRVAL PLECTESLPI YVNAKQYSAI 240 LKRRQVRAKR QAQNKLVKNR KPYLHESRHR HAMKRARGSG GRFLNTKNMQ QSKPSSPKHD 300 RNIFNRQAGG NISSYMVQHS ESGS |
| Nucleic Localization Signal ? help Back to Top | |||
|---|---|---|---|
| No. | Start | End | Sequence |
| 1 | 268 | 277 | RHRHAMKRAR |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT1G17590.2 | 4e-33 | NF-YA family protein | ||||
| ©2010-2022, Center
for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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