PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT33624.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family NAC
Protein Properties Length: 199aa    MW: 23367.5 Da    PI: 9.5836
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT33624.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM68.91.4e-21111403128
         NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykv.ePwdLpkkvkaeekewyfFskrdkkyatgkrknratk.sgyWkatgkdkevlskkge 98 
                 +G+rFhPt++el+ +yL   + +k+++ + + ++ v++y   ePw+L     ++++  yf ++++k++++  r +r++  +g+Wk +gk ++v++ +g+
  PHT33624.1  11 MGYRFHPTNKELL-KYLLGFAINKPFPQQYHnMQLVNLYADkEPWELFDG--TKNNTGYFITQQNKEKEQHVRVKRTVGiNGTWKLQGKVNKVFDDQGK 106
                 7************.788888888886664444****9997559****633..355677**********9*******66569****************** PP

         NAM  99 lvglkktLvfy....kgrapkgektdWvmheyrl 128
                 l+g  k L +     ++++++  + +W+m ey+l
  PHT33624.1 107 LMGYVKNLKYKphpqHKKSSDNPNGEWLMTEYSL 140
                 **********987765566667799*******97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 199 aa     Download sequence    
MSSHHQAKDM MGYRFHPTNK ELLKYLLGFA INKPFPQQYH NMQLVNLYAD KEPWELFDGT  60
KNNTGYFITQ QNKEKEQHVR VKRTVGINGT WKLQGKVNKV FDDQGKLMGY VKNLKYKPHP  120
QHKKSSDNPN GEWLMTEYSL YDRYVDPKKI KNKGFVVCKI KKKEEKHGDN KQGVNNNEDA  180
AEYIDSVLQD QEDISIINE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10500.14e-16NAC family protein