PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT33626.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

NAC

Protein Properties

Length: 218aa MW: 25548.8 Da PI: 6.9695

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT33626.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	68.1	2.4e-21	11	140	3	128
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykv.ePwdLpkkvkaeekewyfFskrdkkyatgkrknratk.sgyWkatgkdkevlskkge 98 +G+rFhPt++el+ +yL + +k+++ + ++ v++y ePw+L ++++ yf ++++k++++ r +r++ +g+Wk +gk ++v++ +g+ PHT33626.1 11 MGYRFHPTNKELL-KYLLGFAINKPFPQQYQyMQLVNLYADkEPWELFDG--TKNNTGYFITQQNKEKEQHVRVKRTVGiNGTWKLQGKVNKVFDDQGK 106 7**********.77888877888555444499999997559633..355677******9***66569************** PP NAM 99 lvglkktLvfy....kgrapkgektdWvmheyrl 128 l+g k L + ++++++ + +W+m ey+l PHT33626.1 107 LMGYVKNLKYKphpqHKKSSDNPNGEWLMTEYSL 140 ******987765566667799*****97 PP

Sequence ? help Back to Top
Protein Sequence Length: 218 aa Download sequence
MSSHHQAKDM MGYRFHPTNK ELLKYLLGFA INKPFPQQYQ YMQLVNLYAD KEPWELFDGT 60 KNNTGYFITQ QNKEKEQHVR VKRTVGINGT WKLQGKVNKV FDDQGKLMGY VKNLKYKPHP 120 QHKKSSDNPN GEWLMTEYSL YDRYVDPKKI KNKGFVVCKI KKKEEKHGDN KQGVNNDEDA 180 AEYIDSVLQD EEDISIINEN NEYLEGDEVE EHIIAILG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10500.1	5e-16	NAC family protein