PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT33666.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

YABBY

Protein Properties

Length: 144aa MW: 16214.5 Da PI: 8.685

Description

YABBY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT33666.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	YABBY	135.9	5e-42	4	143	3	159
YABBY 3 vfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvssekl 101 v+ss +++Cyv+CnfC+t+lav +P++ l+ +vtv+CGhC++l ++ + q++ + + +l+ +++k + ++++sas s+sse l PHT33666.1 4 VQSSEQHLCYVRCNFCSTVLAVGIPYKRLMDTVTVKCGHCSNLSFLSTRPPIQAQCFDH----------QPTLQGYCNEFKNKGQASSSAS-STSSEPL 91 5678889********************************986655555444433322..........2233333344443333333332.3333343 PP YABBY 102 senedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaakn 159 + p+++ v++PPek+ r Psaynrf+keeiqrik++nP+i hreafsaaakn PHT33666.1 92 ------SPPHAHFVVKPPEKKHRLPSAYNRFMKEEIQRIKTENPEIPHREAFSAAAKN 143 ......456677789****************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 144 aa Download sequence
MDYVQSSEQH LCYVRCNFCS TVLAVGIPYK RLMDTVTVKC GHCSNLSFLS TRPPIQAQCF 60 DHQPTLQGYC NEFKNKGQAS SSASSTSSEP LSPPHAHFVV KPPEKKHRLP SAYNRFMKEE 120 IQRIKTENPE IPHREAFSAA AKNV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69180.1	7e-53	YABBY family protein