PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT33784.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family B3
Protein Properties Length: 230aa    MW: 26508.3 Da    PI: 6.4144
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT33784.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B332.61.4e-102662188
                HH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS
          B3 21 kfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88
                +fa+++g  + ++ +++l+de  r W+v +   + +  + +t+GW +F  ++gL++gD   F+l+++ 
  PHT33784.1  2 DFAKSNGWMN-RKCEMILKDEAERCWSVWI--GRMGHNFGITRGWTNFRVEKGLQVGDAYKFELIKNG 66
                5888884333.4459***************..888888*************************99863 PP
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    
MDFAKSNGWM NRKCEMILKD EAERCWSVWI GRMGHNFGIT RGWTNFRVEK GLQVGDAYKF  60
ELIKNGKVPI AYFHYVFVPM DYPDFGEVVC SQVSQKTPPS SPPSAEPGGL SRHHVHDVIY  120
YDDGYYVVAS DGSIFSFDKM TLDLKEISGP APVRYSDDFD TKFHLIKTTT NELLMIHISN  180
PNHIFIIKCE DLQDVSPILC TIQVRDIKNY DVPSRWQLLH PIFFPDIKFS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24700.11e-09B3 family protein