PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT33785.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family B3
Protein Properties Length: 141aa    MW: 16695.3 Da    PI: 8.3347
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT33785.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B349.76.6e-161395499
                E-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
          B3  4 vltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99
                       +k+g + +p  f+ ++ +g+  e+++  +  ++g++W +kl  + k+    ++kGW eF+++n+++ gD++vF+++g++ef   v +f++
  PHT33785.1 13 PV--QPGFKHG-IKIPVGFL-KYlKGE--EHIEHAILKRNGKRWLIKL--NDKR----FEKGWGEFAEENDVQLGDMLVFRYEGNMEF--EVCIFDS 95
                44..4556665.9*******.564666..67789999***********..7777....9*************************9999..9999886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 141 aa     Download sequence    
MNIPPKKPHF FKPVQPGFKH GIKIPVGFLK YLKGEEHIEH AILKRNGKRW LIKLNDKRFE  60
KGWGEFAEEN DVQLGDMLVF RYEGNMEFEV CIFDSTHCDR EYAEYLQEER GGGFCLLEEI  120
SKKFKFKVPS STFHVCKWSH Q
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24700.15e-21B3 family protein