PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT33842.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 166aa    MW: 18877.7 Da    PI: 7.0939
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT33842.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH27.74.7e-09143754
                HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
         HLH  7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54
                ++ErrRR+r+N +++ Lr+++Pk +       ++  +iL  +++Y k+L
  PHT33842.1  1 MAERRRRKRLNGRLSMLRSIVPKiS------NMDRTSILADTIDYTKEL 43
                58*********************66......699999*******98776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 166 aa     Download sequence    
MAERRRRKRL NGRLSMLRSI VPKISNMDRT SILADTIDYT KELIEKINNL QQEMELGPNQ  60
LSLMSIFENE KPIEMFLRNS PKFNVERRNM DTIVEINCAG KSSLLLSTLA TLDSSGLEPQ  120
QCVISCFNDF AMHASCSEEM DQRGLANPEE IKQALFRNAG YAGKCL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1310ERRRRKRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65640.11e-52bHLH family protein