PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT33866.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

NAC

Protein Properties

Length: 249aa MW: 28983.5 Da PI: 9.305

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT33866.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	171.4	2.9e-53	9	134	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 lppGfrFhPtdeel+++yL+ +++++++++ ++i+e+d+yk++Pw+Lp+k++ +e+ewyfF++rd+ky++g r+nra+ sgyWkatg+dk+++s ++ PHT33866.1 9 LPPGFRFHPTDEELIMYYLRYQATSRPCPV-SIIPEIDVYKFDPWELPEKAEFGENEWYFFTPRDRKYPNGVRPNRAAVSGYWKATGTDKAIYS-ASKY 105 79**************************.89***********99999*************************************.9999 PP NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128 vg+kk Lvfykg+ pkg+ktdW+mheyrl PHT33866.1 106 VGVKKALVFYKGKPPKGVKTDWIMHEYRL 134 *************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 249 aa Download sequence
MVGKISSDLP PGFRFHPTDE ELIMYYLRYQ ATSRPCPVSI IPEIDVYKFD PWELPEKAEF 60 GENEWYFFTP RDRKYPNGVR PNRAAVSGYW KATGTDKAIY SASKYVGVKK ALVFYKGKPP 120 KGVKTDWIMH EYRLSESKSQ TTKHSGSMRL DDWVLCRIYK KKNLGKTMEM MKVEGEEDVV 180 ESHHQIDATG SLELVFLNLW YKTPFRKCVS TLNVLDLLRI LKLLRLTGNT EVTEKTELLK 240 LLRFPESHD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69490.1	1e-100	NAC family protein