PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT33881.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

TCP

Protein Properties

Length: 366aa MW: 40681.6 Da PI: 7.1874

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT33881.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	124	1.7e-38	74	200	2	89
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg........... 88 +kk +++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++tieWLlqqa+pa++++tgt++++a+ + + s +s+ ++ +s+ PHT33881.1 74 QAKKGTTKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANYSsLNISLRSARHHTTSAsnylahnnfgh 172 57999***********************************************************99999766545555555544433334444444445 PP TCP 89 ...........................k 89 PHT33881.1 173 vhhdrnyfngmglfssensffpsgnlnV 200 5555555555555555555555554442 PP

Sequence ? help Back to Top
Protein Sequence Length: 366 aa Download sequence
METGHHHHDN IINSLQRPNF PLQLLEKRDQ DHTICSNSSL FHPTLHMTTS STYDATCVDD 60 QKPKNQEEPN KIKQAKKGTT KDRHTKVDGR GRRIRMPATC AARVFQLTRE LGHKSDGETI 120 EWLLQQAEPA VIAATGTGTI PANYSSLNIS LRSARHHTTS ASNYLAHNNF GHVHHDRNYF 180 NGMGLFSSEN SFFPSGNLNV HAMLQAKEEL CDNRDQVNNN DDNIGRIKRR SEDQDLLQNY 240 QMGNLLQSST YGSIPASHQI GQNPATTLYM MTNNTSTTTN NNSSHHDTSN CSMWASPSNN 300 IDNSTIRGGL LNFMNFHQPI LETRGGGGTA AEGQWGMLTA AMTNYRQSDH ASGSNLHSGA 360 DDHHHS

Sequence ? help Back to Top

Protein Sequence Length: 366 aa Download sequence

METGHHHHDN IINSLQRPNF PLQLLEKRDQ DHTICSNSSL FHPTLHMTTS STYDATCVDD  60
QKPKNQEEPN KIKQAKKGTT KDRHTKVDGR GRRIRMPATC AARVFQLTRE LGHKSDGETI  120
EWLLQQAEPA VIAATGTGTI PANYSSLNIS LRSARHHTTS ASNYLAHNNF GHVHHDRNYF  180
NGMGLFSSEN SFFPSGNLNV HAMLQAKEEL CDNRDQVNNN DDNIGRIKRR SEDQDLLQNY  240
QMGNLLQSST YGSIPASHQI GQNPATTLYM MTNNTSTTTN NNSSHHDTSN CSMWASPSNN  300
IDNSTIRGGL LNFMNFHQPI LETRGGGGTA AEGQWGMLTA AMTNYRQSDH ASGSNLHSGA  360
DDHHHS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G58100.1	5e-45	TCP family protein