PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT33988.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

WRKY

Protein Properties

Length: 449aa MW: 50611.4 Da PI: 8.0531

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT33988.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	93.3	1.9e-29	227	286	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK kg+++pr+YYrCt + +Cpv+k+v+r+ ed +++++tYeg+Hnh+ PHT33988.1 227 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVSpTCPVRKQVQRCCEDMSILITTYEGTHNHS 286 58************************999**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 449 aa Download sequence
MLRKDGAMNS TNTSTTIYDK EEELLASTKK ATITTTSMNT NSRNSFVTSI KNQEDQLINS 60 TKCQIVEAKE ENERLKWMLS KTMKDYKSLQ MHFQGIITQN SNNIIAKSPS NIIEKEEVEH 120 LSLSLGRSSS CNTSKEFKKE LYDQNDECKS QKNCKLYDGL DLGLDCKFSQ DHLTYDHSPE 180 NSFEESNKEN IKMARISRNH DEDEDEDFWD KKKARVSIRA VCGTTTMNDG CQWRKYGQKI 240 AKGNPCPRAY YRCTVSPTCP VRKQVQRCCE DMSILITTYE GTHNHSLPFS ATAMASTTSA 300 AVSMLRCTSS STSALPQQSG LPNVNHNLHG KFNFTNSNSN NLLPTYNNNT STFYLPPKTS 360 ISTCQSHPTI TLDFTTNTSL SSTHHTLISS QRYPSNSLKF STPISPSTSS TYLGRPCFSH 420 QPLMITSKNN QNTIEYSGEV KNSDDWIQK

Sequence ? help Back to Top

Protein Sequence Length: 449 aa Download sequence

MLRKDGAMNS TNTSTTIYDK EEELLASTKK ATITTTSMNT NSRNSFVTSI KNQEDQLINS  60
TKCQIVEAKE ENERLKWMLS KTMKDYKSLQ MHFQGIITQN SNNIIAKSPS NIIEKEEVEH  120
LSLSLGRSSS CNTSKEFKKE LYDQNDECKS QKNCKLYDGL DLGLDCKFSQ DHLTYDHSPE  180
NSFEESNKEN IKMARISRNH DEDEDEDFWD KKKARVSIRA VCGTTTMNDG CQWRKYGQKI  240
AKGNPCPRAY YRCTVSPTCP VRKQVQRCCE DMSILITTYE GTHNHSLPFS ATAMASTTSA  300
AVSMLRCTSS STSALPQQSG LPNVNHNLHG KFNFTNSNSN NLLPTYNNNT STFYLPPKTS  360
ISTCQSHPTI TLDFTTNTSL SSTHHTLISS QRYPSNSLKF STPISPSTSS TYLGRPCFSH  420
QPLMITSKNN QNTIEYSGEV KNSDDWIQK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15130.1	4e-51	WRKY family protein