PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT34067.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 261aa    MW: 28725 Da    PI: 7.5843
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT34067.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.51.6e-10145192455
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +h+ +Er RR++i +++  L++++P +    +k   Ka +L + ++YI+sLq
  PHT34067.1 145 SHSLAERARREKISERMKVLQDIVPGC----NKVIGKALVLDEIINYIQSLQ 192
                 8*************************9....677*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    
MDPQTSLINH AGGFQSPPPP PFNLADIWQF PGNAGGNATA YSFPVSASAV EQEHNMSDVP  60
KSDPMRRARK RREDDECAKG VSTSGNGLTE SDSKRLKATR LNENCEARCD GEGNSRKSAE  120
QPAKPAEPPK DYIHVRARRG QATDSHSLAE RARREKISER MKVLQDIVPG CNKVIGKALV  180
LDEIINYIQS LQHQVEFLSM KLEAVNSRAA SIEGFPSKDF GHQTFDPNAM AFGSQATREY  240
ARGTSPEWLH MQLGGGFERT T
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16673RRARKRRE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59640.11e-85bHLH family protein