PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT34326.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

bHLH

Protein Properties

Length: 459aa MW: 51006.3 Da PI: 6.7866

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT34326.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	35.6	1.6e-11	396	441	6	55
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +++Er RR ri +++ +L+el+P+ +k + a++L Av+YIk+L+ PHT34326.1 396 SIAERVRRTRISERMRRLQELVPNM----DKQTNTADMLDFAVDYIKELE 441 689*******************7....688*************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 459 aa Download sequence
MDHSRLQQQP ITSGLTRYRS APSSYFSSLL SSTPVTGGGC GYARDDFSHL QNARASNTDI 60 EQVFARFVAS IGNQNSNSNS DNFCANQQIQ ENFTSNMNVR SDFIVPKQEV IQQHQHKRLA 120 RHRNSDYSLV SQMNYQNQAQ QQIQQFISPV KKEPETLQQS TDCVSASRMN YQTQVQQIDK 180 SRVATSSAMD NSFVFMTSVN SASLTSGGGG GSGGGNSNLT RYNSSPAGFF DQINNDNEYG 240 AMRGIGSYGT GASAATETSL STPRSFNTQL GFSSGKPPAS PRLMAPISEF GDKVLEENST 300 DNEHKNAESC ITDFPMPSWE DSHILSDDFL KAEDNEIEPF SNEDASHNQN NECLARPPLP 360 LSHHLSLPTS TMEKLLQDSV HLNVRAKRGC ATHPRSIAER VRRTRISERM RRLQELVPNM 420 DKQTNTADML DFAVDYIKEL EKQVKILAER RAKCTCINK

Sequence ? help Back to Top

Protein Sequence Length: 459 aa Download sequence

MDHSRLQQQP ITSGLTRYRS APSSYFSSLL SSTPVTGGGC GYARDDFSHL QNARASNTDI  60
EQVFARFVAS IGNQNSNSNS DNFCANQQIQ ENFTSNMNVR SDFIVPKQEV IQQHQHKRLA  120
RHRNSDYSLV SQMNYQNQAQ QQIQQFISPV KKEPETLQQS TDCVSASRMN YQTQVQQIDK  180
SRVATSSAMD NSFVFMTSVN SASLTSGGGG GSGGGNSNLT RYNSSPAGFF DQINNDNEYG  240
AMRGIGSYGT GASAATETSL STPRSFNTQL GFSSGKPPAS PRLMAPISEF GDKVLEENST  300
DNEHKNAESC ITDFPMPSWE DSHILSDDFL KAEDNEIEPF SNEDASHNQN NECLARPPLP  360
LSHHLSLPTS TMEKLLQDSV HLNVRAKRGC ATHPRSIAER VRRTRISERM RRLQELVPNM  420
DKQTNTADML DFAVDYIKEL EKQVKILAER RAKCTCINK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G51140.1	7e-44	bHLH family protein