PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT34361.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

WRKY

Protein Properties

Length: 170aa MW: 19508.1 Da PI: 9.9041

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT34361.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	104.1	7.4e-33	91	149	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK vk+++fprsYYrCt++gC+vkk+v+r ++d+ vv++tYeg H h+ PHT34361.1 91 LDDGYRWRKYGQKAVKNNRFPRSYYRCTHQGCNVKKQVQRLSKDEGVVVTTYEGMHSHP 149 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 170 aa Download sequence
MENYPPLFPS SSSSLEFSLM NKKSSNTHAK EVLLFQGKNN GFLGLMASME TPSGVTNSFE 60 DDVIKSCKKK GEKTIKKPRY AFQTRSQVDI LDDGYRWRKY GQKAVKNNRF PRSYYRCTHQ 120 GCNVKKQVQR LSKDEGVVVT TYEGMHSHPI DKSTDNFEHI LSQMQVYASF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G13080.1	4e-59	WRKY family protein