PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT34629.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

C2H2

Protein Properties

Length: 341aa MW: 38921.2 Da PI: 6.8164

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT34629.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.9	7.9e-05	176	195	1	20
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 ++Cp C k+F+r n++ H+ PHT34629.1 176 FSCPLCFKTFNRYNNMQMHM 195 89*****************9 PP
2	zf-C2H2	14.6	9.6e-05	260	282	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C +Cgk F + + ++H +++ PHT34629.1 260 FMCRKCGKAFAVRGDWRTHEKNC 282 89*****************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 341 aa Download sequence
MSDPYTNYFH GWFNNLNPLY HSSSSSTPPF SSYNYILPSS TNFQYFQSSP PPSPPLKEPL 60 PLLSLSPTRQ IHQDQDYSST MEVDNNNNKE NKEESFISNF GDEDQDNESV SVALQLGLPN 120 PSPQDVISRI SNTNKEQEEE LTVANIGYSS TTSSTLHKGQ YWIPTPAQIL IGPTQFSCPL 180 CFKTFNRYNN MQMHMWGHGS QYRKGPESLR GTQPTAMLRL PCFCCAPGCR NNIDHPRAKP 240 LKDFRTLQTH YKRKHGIKPF MCRKCGKAFA VRGDWRTHEK NCGKLWYCTC GSDFKHKRSL 300 KDHIKAFGNG HEAYGIDCLE EEDEPASEIE QDHDHDHDPS N

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G57670.1	1e-131	C2H2 family protein