PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT34703.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

Dof

Protein Properties

Length: 305aa MW: 33145.7 Da PI: 9.0502

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT34703.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	125.5	1.7e-39	71	130	3	62
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 e lkcprCds+ntkfCyynny+lsqPr+fCk+CrryWtkGGalrnvPvGgg+r+nk+++ PHT34703.1 71 EPGLKCPRCDSSNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNVPVGGGCRRNKRNK 130 56789****************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 305 aa Download sequence
MVFSSFPVYL DHPNLHHLQQ EPDHHQQGSP GLENPQLPPV QPPTLVGGGA GSIRPGSMVD 60 RARIARLPLP EPGLKCPRCD SSNTKFCYYN NYNLSQPRHF CKNCRRYWTK GGALRNVPVG 120 GGCRRNKRNK SSNNNSSKSG GQMGNSNIAS TSAIPSSCSM EMIGHHFSQS STQFTPLMAA 180 FQNLNNYAGF QPPHQLVGEM GFHVGSNNLL PSLSASNFEH PTNLYPNFQG EGGTTTTIEA 240 ANGATQQVKM EDSNISTTKQ GLNSSTKQFL GTLENNQYWG ATNSNSWTGF SALNNNSSST 300 SNHLL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G55370.1	2e-39	Dof family protein