PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT34728.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family MYB
Protein Properties Length: 271aa    MW: 31548.6 Da    PI: 9.9284
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT34728.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding51.72e-16956148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg+WT+eEd++lv +vk++G ++W+  a+  g++Rt+k+c++rw +yl
       PHT34728.1  9 RGPWTEEEDLQLVFYVKLFGDRRWDFLAKVSGLKRTGKSCRLRWVNYL 56
                     89********************************************97 PP
2Myb_DNA-binding52.11.5e-1662107148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg++T++E+   ++++ ++G++ W++Iar+++ gRt++++k++w++++
       PHT34728.1  62 RGKMTPQEERVVLELHSKWGNR-WSRIARKIP-GRTDNEIKNYWRTHM 107
                      89********************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    
MAQEEIMRRG PWTEEEDLQL VFYVKLFGDR RWDFLAKVSG LKRTGKSCRL RWVNYLNPDL  60
KRGKMTPQEE RVVLELHSKW GNRWSRIARK IPGRTDNEIK NYWRTHMRKK AQEQRKKSSI  120
SPSSSFSNSS SSSSISHEEN ERNFYDTGGL ELLKADGEMK SSDQEQGGET FQALAQAVTA  180
NVQANPAPAL QQQGKEVRKI TQVMHVSEEH SVELAAYRLK DLAYDWVVAW RKGRGEGVVP  240
TTWQEFQDAF LDKFFPLKMR EAKVEEFMNQ R
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G46130.12e-68MYB family protein