PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT34729.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family C2H2
Protein Properties Length: 189aa    MW: 21174.4 Da    PI: 4.7584
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT34729.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.97.6e-052951123
                EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                y+C+ C++ Fs+   L  H++ H
  PHT34729.1 29 YRCSFCKRGFSNAQALGGHMNIH 51
                9********************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 189 aa     Download sequence    
MENDPNSSNS EKYQITWNAN EGISQVKCYR CSFCKRGFSN AQALGGHMNI HRKDRAKLRE  60
ISIETSDIKK SISPSPDIPA PSSTDELLQQ EVSSDETSSP SKRPCITLEE QHQHHHPNPI  120
SQEKDENHEL IIGGDLSQLP LFVDTPSKEV INLIETQEGN KDMQLSVDSK LDLELRLGPE  180
PSESSEKPQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G53820.12e-17C2H2 family protein