PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT34822.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

NAC

Protein Properties

Length: 216aa MW: 25168.6 Da PI: 5.4397

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT34822.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	42.3	2.3e-13	46	172	3	128
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykv..ePwdLp.k...kvkaeekewy.fFskrdkkyatgkrknratksgyWkatgkdkevl 93 +G+rFhPtd e + +Lkk +++++++ + + +++d+y++ ePw++ + + + +++++ +F++++ + + g Wk + + k+v+ PHT34822.1 46 RGVRFHPTDTEGL-TFLKKFMAKQEMNDSGFiTTNIDVYDSeeEPWKIYsRgvpCGD-ADDSLFrYFITKK-----------SSNLGNWKLQSEGKPVH 131 7********99.99*****9998883455688668*744343222.2333431333322...........234699******9 PP NAM 94 sk...kgelvglkktLvfy...kgrapkgektdWvmheyrl 128 + ++ ++g+kk + + +++ ++ W+m+ey+l PHT34822.1 132 RDsssSTVVMGCKKKMCYMinnNEELREDDGHYWMMKEYEL 172 9865555669*****54322333444577****97 PP

Sequence ? help Back to Top
Protein Sequence Length: 216 aa Download sequence
MWSMERVERM QTLALQCGGT EVVSRIGSLI ETLNSLKARN RGMEKRGVRF HPTDTEGLTF 60 LKKFMAKQEM NDSGFITTNI DVYDSEEEPW KIYSRGVPCG DADDSLFRYF ITKKSSNLGN 120 WKLQSEGKPV HRDSSSSTVV MGCKKKMCYM INNNEELRED DGHYWMMKEY ELSNVILHQF 180 DDDRRDYVLW AIKKKFIETC FSEMENVSEE FGAIQV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G12910.1	8e-06	NAC family protein