PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT34865.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family MYB_related
Protein Properties Length: 192aa    MW: 20943.5 Da    PI: 4.7128
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT34865.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding322.8e-1055911147
                     HHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding 11 llvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     l++++ +++G+g+W+ I+r +g+ Rt+ q+ s+ qk+
       PHT34865.1 55 LFLQGLEKYGKGDWRDISRNFGLSRTPTQVASHAQKF 91
                     8**********************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 192 aa     Download sequence    
MSLDRTCKSS TLTKEEDKAF ENALADYSGD GDLIQQIAAA VPGNLLKKFS NIILLFLQGL  60
EKYGKGDWRD ISRNFGLSRT PTQVASHAQK FYTRLNDNNN PKKRRSIHDV TSAADIIEPS  120
QGPCGGQLQW LITNYVTDAF DTGMLSIPEP VTTRISTDAI EGASADDLEK IPLGAAVGNE  180
LNSSFPGMVE YV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08520.16e-27MYB family protein