PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT34992.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

TALE

Protein Properties

Length: 736aa MW: 81197 Da PI: 6.9948

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT34992.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.9	1.9e-09	439	476	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +++ LAk++gLt +qV++WF N R + PHT34992.1 439 FEHflHPYPKDSDKMMLAKQTGLTRSQVSNWFINARVR 476 554459******************************88 PP
2	BELL	112.9	1.8e-36	303	374	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 +rqelq+kkakL+s+l+eVd+rY+qy++q+++++ sFe++ag+gs+k+Yt+lAl++iS++FrcLkdai++qi PHT34992.1 303 QRQELQMKKAKLVSMLDEVDQRYRQYHQQMKMIAISFEQAAGIGSSKSYTQLALHTISKQFRCLKDAISGQI 374 69*********************************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 736 aa Download sequence
MAIYYQGGSE IQADGLQTLY LMNPNYIGYA DTHHHQQQQS ANMFFLNSVP GGNLPHAALS 60 AQPHAQRHLV GLPLQAGFQD PDRPSIEEIS ASHHGLLSRF WSSADQNSSG GGGEGGGGNG 120 SQSRILSSTV VSPNSGTGGD TTTDFASQLG FQRPGLVSLT HAHHQGLSLS LSLQQQQQQQ 180 QTNFRSFPLD HHEISTTNHQ VGVLSSSPSP RTNSNNIDPT QGSGASSSFS LSKGTILGSK 240 YLKVAQDLLD EVVNVGKNIK LSDGLEDVAK EKYKLDNELI SLASDDVESS RQKNSVVELT 300 TAQRQELQMK KAKLVSMLDE VDQRYRQYHQ QMKMIAISFE QAAGIGSSKS YTQLALHTIS 360 KQFRCLKDAI SGQIKDTSKT LGEEENIGGK IEGSKLKFVD HQLRQQSALQ QLGMMQTNAW 420 RPQRGLPERA VSVLRAWLFE HFLHPYPKDS DKMMLAKQTG LTRSQVSNWF INARVRLWKP 480 MVEEMYMEEV KKNNQEQNGL DQENIVNKDI EPNNEVVGSK SNAPQDKLTI SSNIHDASPR 540 EISTSTISTS PKGGDGLLPA QAAPGFSFIG TLNMENISDQ RNNKKARNDM QNSSTSTLLS 600 VDTEINKAGE DATIKSEKLN GNNNSTHQTR ECYPLMTPYT MHDQFGTRFN PNHQQLTTTT 660 STFHQGNGHV SLTLGLPPNS ENQHNFLSNN QNIGLGSHYN RMNNPQASHH PNISYETIDF 720 QSGKRYAAQL LQDYVS

Sequence ? help Back to Top

Protein Sequence Length: 736 aa Download sequence

MAIYYQGGSE IQADGLQTLY LMNPNYIGYA DTHHHQQQQS ANMFFLNSVP GGNLPHAALS  60
AQPHAQRHLV GLPLQAGFQD PDRPSIEEIS ASHHGLLSRF WSSADQNSSG GGGEGGGGNG  120
SQSRILSSTV VSPNSGTGGD TTTDFASQLG FQRPGLVSLT HAHHQGLSLS LSLQQQQQQQ  180
QTNFRSFPLD HHEISTTNHQ VGVLSSSPSP RTNSNNIDPT QGSGASSSFS LSKGTILGSK  240
YLKVAQDLLD EVVNVGKNIK LSDGLEDVAK EKYKLDNELI SLASDDVESS RQKNSVVELT  300
TAQRQELQMK KAKLVSMLDE VDQRYRQYHQ QMKMIAISFE QAAGIGSSKS YTQLALHTIS  360
KQFRCLKDAI SGQIKDTSKT LGEEENIGGK IEGSKLKFVD HQLRQQSALQ QLGMMQTNAW  420
RPQRGLPERA VSVLRAWLFE HFLHPYPKDS DKMMLAKQTG LTRSQVSNWF INARVRLWKP  480
MVEEMYMEEV KKNNQEQNGL DQENIVNKDI EPNNEVVGSK SNAPQDKLTI SSNIHDASPR  540
EISTSTISTS PKGGDGLLPA QAAPGFSFIG TLNMENISDQ RNNKKARNDM QNSSTSTLLS  600
VDTEINKAGE DATIKSEKLN GNNNSTHQTR ECYPLMTPYT MHDQFGTRFN PNHQQLTTTT  660
STFHQGNGHV SLTLGLPPNS ENQHNFLSNN QNIGLGSHYN RMNNPQASHH PNISYETIDF  720
QSGKRYAAQL LQDYVS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35940.1	2e-96	TALE family protein