PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT35021.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family NF-YB
Protein Properties Length: 176aa    MW: 19688 Da    PI: 4.6324
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT35021.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB44.92.7e-1427123596
       NF-YB   5 drflPianvsrimkkvlPa...nakis..kdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelege 96 
                 ++ lP a + r++k  l +   ++ +s  kd+     e +  fi ++++ a+d c++ kr+ in++d++ al ++ f +++epl++ l+ +re +++
  PHT35021.1  27 QEGLPKAIIRRLVKDKLSQlstDSDLSllKDSLTAFSESARIFIHYLSATANDICKESKRQIINAEDVFKALEDIEFPEFIEPLRASLEGFREKKRK 123
                 55699999*****98876411144443338999999*********************************************************8876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 176 aa     Download sequence    
MGEIEKNNKD KEIEKEKAGG TTVQIEQEGL PKAIIRRLVK DKLSQLSTDS DLSLLKDSLT  60
AFSESARIFI HYLSATANDI CKESKRQIIN AEDVFKALED IEFPEFIEPL RASLEGFREK  120
KRKSSSSKSP ESNKKAKVKE PVENGKGKMK ELPSDNENED GQAGEEINEV EDSADD
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1120150KKRKSSSSKSPESNKKAKVKEPVENGKGKMK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G27470.13e-28NF-YB family protein