PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT35039.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

NAC

Protein Properties

Length: 255aa MW: 29332.2 Da PI: 8.7189

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT35039.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	144.2	7.1e-45	6	136	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk.....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 pGfrF Pt+eel+++yL+kk+egk+ +l++vi+ v iy+++Pw+Lp+ + +++++w+fF++r++++a+g r+ r+t+sgyWkatg+ v+s+ PHT35039.1 6 SPGFRFYPTEEELISFYLHKKLEGKTPKLDRVIPVVTIYDLDPWHLPNfhgelC-MGDREQWFFFVPRQEREARGGRPCRTTTSGYWKATGSPSYVYST 103 69*************************999***********5466532.34667*********************************** PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 +++++g+kk++vfykg+ap+g kt+W m+eyr+ PHT35039.1 104 NSKVIGVKKSMVFYKGKAPTGGKTKWKMNEYRA 136 *****************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 255 aa Download sequence
MGEIISPGFR FYPTEEELIS FYLHKKLEGK TPKLDRVIPV VTIYDLDPWH LPNFHGELCM 60 GDREQWFFFV PRQEREARGG RPCRTTTSGY WKATGSPSYV YSTNSKVIGV KKSMVFYKGK 120 APTGGKTKWK MNEYRAIQEE NNSTTSSTFS IPKLRHEMSL CRVYVISGSF RAFDRRPVAP 180 VITTSEPSKS VIKENVNKME ATSSLDEESL AIQEQDYLNY FHGDQNPNVN EAINKRVKSD 240 FHDVPFSGWE LFDGR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G22380.1	1e-81	NAC family protein