PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT35148.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family GATA
Protein Properties Length: 337aa    MW: 37208.7 Da    PI: 9.6294
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT35148.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA58.31e-18222255134
        GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                 C++C + kTp+WR+gp g+k+LCnaCG++yr+ +
  PHT35148.1 222 CTHCEVAKTPQWREGPLGPKSLCNACGVRYRSGR 255
                 *******************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 337 aa     Download sequence    
MTMVEHGGYM DGSPNDPIVD DDFEDILNFL DFPMENLEED GVGVEWDSSE SKFLGPIPTE  60
ALMSFPPMPQ GNIRNGRVNA MANSRPTIKF TEVQGTTGTF QTQSPVSVLE GSNSCSGGKS  120
IPIKPIKHDT VIPVRPRSKR ARPSAVNPWI LMAPISSTRV ASKKISDAKK GKEKKRRLPI  180
LSGAKESTTC YVQQINDTVP QIPDFSKKKI TSTQQSSFVK KCTHCEVAKT PQWREGPLGP  240
KSLCNACGVR YRSGRLFPEY RPAASPTFVP SVHSNSHRKV VEMRKKSIYG GAVVEEPPKM  300
IIGRKRKALP EPTIVDDPPM SPAPEFVPMS SYLFDVY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08010.21e-42GATA family protein