PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT35172.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

C2H2

Protein Properties

Length: 210aa MW: 24196.8 Da PI: 10.1195

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT35172.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.6	4.6e-05	76	96	3	23
ETTTTEEESSHHHHHHHHHHT CS zf-C2H2 3 CpdCgksFsrksnLkrHirtH 23 C++C+k F r nL+ H r H PHT35172.1 76 CEICNKGFQRDQNLQLHRRGH 96 *******************88 PP
2	zf-C2H2	13.3	0.00025	151	173	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k + +s+ k H + + PHT35172.1 151 WKCEKCSKKYAVQSDWKAHNKIC 173 58*****************8876 PP

Sequence ? help Back to Top
Protein Sequence Length: 210 aa Download sequence
MMSNDELSCS IRGGFTFIQD PKNPSSNTSH NPNPNPNPTA SSANKRKRNL PGNPDPDAEV 60 IALSPKSLMA TNRFLCEICN KGFQRDQNLQ LHRRGHNLPW KLKQRNNKEL IKKKVYICPE 120 SSCVHHDPSR ALGDLTGIKK HYSRKHGEKK WKCEKCSKKY AVQSDWKAHN KICGTREYKC 180 DCGKLFSRYF IINLLLLIMR ILFNFSESYD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G45260.1	2e-84	C2H2 family protein