PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT35314.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

WRKY

Protein Properties

Length: 223aa MW: 25822.2 Da PI: 6.7392

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT35314.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	87.4	1.2e-27	147	205	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYG+K+vk++++ r+YY+C+s +C+vkk+ver+ +d +++++tYeg+Hnhe PHT35314.1 147 LDDGYKWRKYGKKKVKSNTHLRNYYKCSSGDCKVKKRVERDGNDSSYLITTYEGQHNHE 205 59********************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 223 aa Download sequence
MFGSSTFQET SNVTSHQYQT INPNFAFHDP LINMNQDHGH NNNKYQDFDT SFLDMLLDGG 60 DQEYYSNYSN NSYNNNVSFY SENPFMQQEI STSTYSTSGN SSTASSFDAT LTNIHMNHEN 120 SSMGIEKEKK GEKHAIAFRT KTQLEILDDG YKWRKYGKKK VKSNTHLRNY YKCSSGDCKV 180 KKRVERDGND SSYLITTYEG QHNHESPFVI YCHDEMPTSK YLR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64810.1	3e-24	WRKY family protein