PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT35420.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 207aa    MW: 22874.1 Da    PI: 7.3461
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT35420.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.38.8e-1178122451
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYI 51 
                 ++  rEr RR+++N++f eL  ll +    + +K +K++iL  Av+ +
  PHT35420.1  78 SKACRERLRREKLNDKFMELAALLEPG---RPPKTDKSAILIDAVRVV 122
                 6789**********************8...89*************876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 207 aa     Download sequence    
MITPENIDWL YDYNFYAISI PDANFSFSAS GFSWSMQGFN GSTNASVDID GSIGESDCLK  60
ESGSKKRARA ESCTSSSSKA CRERLRREKL NDKFMELAAL LEPGRPPKTD KSAILIDAVR  120
VVEKHELRDE KQRLKSEKEK LEQQLKTMSA QPGFLPPAMP GAFAAPVQAT VSKLVPIVSY  180
PGMAMWQFMP PAAIDTSQDH VLRPPVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G54680.14e-71bHLH family protein