PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT35607.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family GeBP
Protein Properties Length: 178aa    MW: 20206.5 Da    PI: 9.7877
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT35607.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF573682e-21781542098
      DUF573  20 idfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWgs 98 
                 id+++k++++p +d+  ++ef+kks+++++sk ql +KirrLK K+ ++  k ++gke +++k+h+qk +elskkiW++
  PHT35607.1  78 IDYRSKKKADPIADLGTVHEFIKKSLHVDASKVQLQDKIRRLK-KYMNNAGK-ERGKERVLTKAHEQKEYELSKKIWDK 154
                 9*****************************************8.67777777.7***********************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 178 aa     Download sequence    
MVGILGCGRH SGHELFTGSY LLYTILLANN GQARLEPVCT VLGKLGSCDV GIDEEYYLIN  60
LASSHMLVSK IKPCRWTIDY RSKKKADPIA DLGTVHEFIK KSLHVDASKV QLQDKIRRLK  120
KYMNNAGKER GKERVLTKAH EQKEYELSKK IWDKEKSDKW VQVEVVKVDN VAASMGMR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61730.12e-12GeBP family protein