PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT35668.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 185aa    MW: 20974.2 Da    PI: 10.0287
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT35668.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH25.42.6e-081665654
                HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
         HLH  6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54
                + +E++RR+++++  ++L ++lP+ +s  +++     +    Av+YI sL
  PHT35668.1 16 KYVEKNRRNHMKNLCNQLHSMLPThPSTSKGTTTAVPDQIDAAVNYIESL 65
                568*********************88777777788899*********998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 185 aa     Download sequence    
MERHMKRKSG PKLERKYVEK NRRNHMKNLC NQLHSMLPTH PSTSKGTTTA VPDQIDAAVN  60
YIESLKMNLE KNKKHLEELK MGPKKAQSSN TTNEPGPSSK PPPQIEFHEM GPNMVVVLIT  120
SLDNIATFNK IIRLCHEEGV EVVSTNFKLN GNSTLQISHE SKVHINKSST IEFKETTLCT  180
KMKEL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.12e-13bHLH family protein