PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT35670.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

C2H2

Protein Properties

Length: 437aa MW: 50127.5 Da PI: 5.6263

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT35670.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.4	0.00023	182	204	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C++ Fs+ L H++ H PHT35670.1 182 YRCSFCKRGFSNAQALGGHMNIH 204 9********************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 437 aa Download sequence
MVYSLVTLPT IPRQHEEKAL PEHWDCGVFI TRYPEYLSEG MDVPSESFEA EYHRIQYATL 60 LRNYGLQKEK KGYVSDNYDP LRPMSFDHLV VPISDSCPSV APFEPPTPIR RVKYKVNEFF 120 EHYKSRLIVW GDAQVEVPLF TSVIVLSINP MEMIDPSNSE NSNKILTWRS EELLGLGQVK 180 FYRCSFCKRG FSNAQALGGH MNIHRRDRAR LREFSSDQNL LSLDINNSIY PPPLLANDDL 240 LQREVSSPYD EAIICSSSKR RCVTYEDQKD HPTSKVNYDH NPPPPPPPPA HNVSLQREVS 300 SYDKTIICSP SKKPCVAYED IDHPTYKVNY DYNPLPHRPP SNDESFQREV SSYDETIISS 360 SSKRPCVTYD EESDHSRAVI IGDLLQLSLF KETPLIKEAR NRMEGKVENK GIQLSPPSEL 420 DLELRLGMEQ PKSSIEI

Sequence ? help Back to Top

Protein Sequence Length: 437 aa Download sequence

MVYSLVTLPT IPRQHEEKAL PEHWDCGVFI TRYPEYLSEG MDVPSESFEA EYHRIQYATL  60
LRNYGLQKEK KGYVSDNYDP LRPMSFDHLV VPISDSCPSV APFEPPTPIR RVKYKVNEFF  120
EHYKSRLIVW GDAQVEVPLF TSVIVLSINP MEMIDPSNSE NSNKILTWRS EELLGLGQVK  180
FYRCSFCKRG FSNAQALGGH MNIHRRDRAR LREFSSDQNL LSLDINNSIY PPPLLANDDL  240
LQREVSSPYD EAIICSSSKR RCVTYEDQKD HPTSKVNYDH NPPPPPPPPA HNVSLQREVS  300
SYDKTIICSP SKKPCVAYED IDHPTYKVNY DYNPLPHRPP SNDESFQREV SSYDETIISS  360
SSKRPCVTYD EESDHSRAVI IGDLLQLSLF KETPLIKEAR NRMEGKVENK GIQLSPPSEL  420
DLELRLGMEQ PKSSIEI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G53820.1	2e-14	C2H2 family protein