PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT35785.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family SBP
Protein Properties Length: 140aa    MW: 16199 Da    PI: 7.0879
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT35785.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP134.82.7e-4256132278
                 -SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS
         SBP   2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 
                 Cqve+C+ad+ +ak yhrrhkvCe+h+kap+v + gl qrfCqqCsrfh+l efD++krsCrrrLa+hnerrrk+++
  PHT35785.1  56 CQVEDCTADMVDAKAYHRRHKVCEFHAKAPAVPIGGLLQRFCQQCSRFHQLAEFDDTKRSCRRRLAGHNERRRKSAH 132
                 **************************************************************************976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 140 aa     Download sequence    
MENSKWEGKR NMMEADMEEE DDEEDEDFVE DTKRKRVLTR SGRKVSMGEG PRQPSCQVED  60
CTADMVDAKA YHRRHKVCEF HAKAPAVPIG GLLQRFCQQC SRFHQLAEFD DTKRSCRRRL  120
AGHNERRRKS AHESPGEGSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33810.17e-42SBP family protein